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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902542.1_cds_XP_016452592.1_46817
CDS Infomation

[gene=LOC107777119] [db_xref=GeneID:107777119] [protein=primary amine oxidase-like] [protein_id=XP_016452592.1] [location=complement(join(35715..35925,36340..36437,36836..37273,37368..37487,37760..39059,41282..41295))] [gbkey=CDS]
Sequence

ATGGCTAGAAGTTGGTTAGTGTGTTTGAGAGAGAGCTCCAATGGATTCCTCTTCACTCTT
TCGCTTGACTTTCTTCTTCTCCATTGTTGTTTTTCTTCTTGCAAATTCATTGTTTTTAGC
TCCAAAACCTATTTTCAACCAACTTCTAAGACTAGGAAAACTAAGTTTGATTCAATTTTA
GAAACACCAATTTTCAAAGTCAACAACACTTTTGATAGCAGCCCATCACACCCTTTAGAT
CCACTTACTATTCAAGAAATCAACAAAGCCCAAATCATTATTTCTTCATATAAGCCTTTC
TTAGGTTCTTTTCCTTCTATTCGTTCTTTATCACTAGATGAGCCTGAAAAAATTCAAGTC
TTAAATTGGAAATATGGTAACCCTCTTCCTCCTAGAAGAGCACTTGTTATTGCTTGGGCC
AATGACCAAGTTCACTTGCTCATTGTGGACTTAAACTTGGGCCAAATTATAAGTCATGTA
CAAAATCCCGGATCGGGCTATCCACCTATATCCATTGATGATGTTCGGGTTGCTATACGG
GCCACATTGTCCAATGAAGAATTCAATAAATCCATTGTTGCGAGAGGAGTTAATTTTTCG
GATTTGGTTTGTACTACGCCATCATCGGGCTGGTTTGGGCCCGAAGAAGAAGGTAAAAGG
ATCATGAAAGTTCGATGTTATTCGAGCCAAGGTACTCCTAGTTTCTATATGAGGCCCATT
GAAGGTCTCATAGTAATTGTTGACATTGACAAAGGTGAAGTTATCAAAATTTTGGACACA
AGTCCAAAAATTCCAATTCCATATGGTGAGAACACGGACTACAGATATACGTCACAAGAC
ATGCCTCCACAAATGGAACCACTTAATCCAATCTCAATAGAACAACCCAAAGGCCCAAGT
TTTACTATCGAAAATGGACATAATGTTAAATGGGCCAATTGGGATTTTCACCTAAAGGCG
GATCAAAGAGCAGGAATAGTCATTTCTAGAGCTCGAATTCGAGACTCAGAAACTGGTGAA
CCAAGAAGTGTAATGTACAAAGGATTTGCTTCAGAATTATTTGTGCCATACATGGATATT
GATGAAAATTGGTATTTTAGATCATATATGGATGCTGGTGAATTTGGGCTTGGGGCAACA
GCAATGTCACTTGTGCCACTTAATGACTGTCCAAGATATTCCTATTTTATGGATGGGCTT
TTTGTTACTGCTGATGGTAAGCCATTTGTTCAGCCCAATATTATTTGTGTGTTTGAGAGA
TATGCTGGTGATATTAGTTGGAGACATTCTGATCTTCCCATTCATGGTTTTGAGGAGCGA
ATAAGAGAGTCAAGACCAAAGGTGACCCTTGTGGCTCGAATGGCTGCATCGGTTGGAAAT
TATGACTACATTTTCGATTGGGAATTTCAAACTGATGGTTTAATTCGTGTTACGGTTGGC
TTATCTGGAATGCTAATGGTAAAGGGGACTCCACAAAATAGCACAAATGAAGATGACATA
TTTGGGGCATTAGTTTCAGAGAATGTGATTGGTGTGGCCCATGATCATTTCATCACATTT
CATTTGGATATGGACATTGATGGCCCAATTAACTCATTTGTAAAAGTTGATCTTGTGAAA
GAAGAAAATCCATCAACAAAAACACCAAGAAAAAGCTATTGGAAAGCTAAAAGGCAAGTA
ATTGAGAAAGAAAAAGATGCTCAAATTAAGCTTAAGCTTTATGAGCCATCTGAATTTCAT
TTCATTAATCCTTTGAGGAAATCAAGAATAGGAAATCCAACAGGGTACAAGATTGTTCCA
AAGGGTAATGCAGCTAGTTTACTTGATCTTGATGATCCACCTCAAGTTAGAAGTGCTTTC
ACCAACAACCAGATATGGGTAACTCCATACAACAAATTTGAACAATGGGCTGGTGGGCTG
TTAGTTTATCAAAGCAAAGGAGAAGACACACTTGCTGTTTGGTCCAACAGAAATCGTGAA
ATCAAAGAGAAGGATATTGTACTGTGGTATACATTAGGATTTCATCACGTACCATGTCAA
GAAGATTTTCCAGTTATGCCAACTGTTACCTCTACCTTTGATTTGAAGCCTCTCAATTTC
TTTGAAAGAAATCCAATACTTAGGGCCAGGCCCAATTTTGATGAAGATTTACCTGTTTGT
CGGTCCACTAATTTAAATTAA

Peptide Sequence

PEP ID

XP_016452592.1
PEP Infomation

PREDICTED: primary amine oxidase-like [Nicotiana tabacum]
Sequence

MARSWLVCLRESSNGFLFTLSLDFLLLHCCFSSCKFIVFSSKTYFQPTSKTRKTKFDSIL
ETPIFKVNNTFDSSPSHPLDPLTIQEINKAQIIISSYKPFLGSFPSIRSLSLDEPEKIQV
LNWKYGNPLPPRRALVIAWANDQVHLLIVDLNLGQIISHVQNPGSGYPPISIDDVRVAIR
ATLSNEEFNKSIVARGVNFSDLVCTTPSSGWFGPEEEGKRIMKVRCYSSQGTPSFYMRPI
EGLIVIVDIDKGEVIKILDTSPKIPIPYGENTDYRYTSQDMPPQMEPLNPISIEQPKGPS
FTIENGHNVKWANWDFHLKADQRAGIVISRARIRDSETGEPRSVMYKGFASELFVPYMDI
DENWYFRSYMDAGEFGLGATAMSLVPLNDCPRYSYFMDGLFVTADGKPFVQPNIICVFER
YAGDISWRHSDLPIHGFEERIRESRPKVTLVARMAASVGNYDYIFDWEFQTDGLIRVTVG
LSGMLMVKGTPQNSTNEDDIFGALVSENVIGVAHDHFITFHLDMDIDGPINSFVKVDLVK
EENPSTKTPRKSYWKAKRQVIEKEKDAQIKLKLYEPSEFHFINPLRKSRIGNPTGYKIVP
KGNAASLLDLDDPPQVRSAFTNNQIWVTPYNKFEQWAGGLLVYQSKGEDTLAVWSNRNRE
IKEKDIVLWYTLGFHHVPCQEDFPVMPTVTSTFDLKPLNFFERNPILRARPNFDEDLPVC
RSTNLN

Transcript Sequence

Gene sequence data has not been registered.